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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7561673 chr2:132233755 G/A TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs7561684 chr2:132233785 G/A TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs7561811 chr2:101095733 A/G LOC285359 chr3:101431278-101432259:+ 0.31 6.3 6.67E-10 Box Plot
THCA rs75628053 chr5:49486184 C/A LOC647121 chr1:121260910-121313686:+ -0.36 -7.69 8.26E-14 Box Plot
THCA rs75631956 chr8:10330616 A/C SGK223 chr8:8175258-8244008:- 0.39 6.25 9.13E-10 Box Plot
THCA rs7564031 chr2:92198583 A/G ZNF514 chr2:95813075-95831158:- -0.23 -5.94 5.54E-9 Box Plot
THCA rs7565546 chr2:132264958 C/T CCDC74B chr2:130896860-130902707:- 0.37 7.46 4.04E-13 Box Plot
THCA rs7565675 chr2:101096802 A/G LOC285359 chr3:101431278-101432259:+ 0.31 6.27 8.06E-10 Box Plot
THCA rs7566189 chr2:132259543 G/A CCDC74B chr2:130896860-130902707:- 0.4 7.2 2.42E-12 Box Plot
THCA rs7566393 chr2:132259726 G/A CCDC74B chr2:130896860-130902707:- 0.4 7.16 3.0E-12 Box Plot
THCA rs75681856 chr1:174916323 C/T SERPINC1 chr1:173872942-173886516:- 0.72 8.71 5.12E-17 Box Plot
THCA rs7568283 chr2:101096603 A/T LOC285359 chr3:101431278-101432259:+ 0.31 6.28 7.43E-10 Box Plot
THCA rs7568519 chr2:101096860 C/T LOC285359 chr3:101431278-101432259:+ -0.31 -6.27 8.06E-10 Box Plot
THCA rs7570679 chr2:113252998 A/G RGPD5 chr2:110550335-110615272:+ -0.49 -6.93 1.34E-11 Box Plot
THCA rs75712789 chr14:39881825 GTCT/G LOC647288 chr13:75811890-75814517:- -0.49 -8.82 2.09E-17 Box Plot